J3_9SUM_024
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- CCAUUC*GG*UG
- Length
- 10 nucleotides
- Bulged bases
- 9SUM|1|B|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_26985.4
- Basepair signature
- cWW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 8
Unit IDs
9SUM|1|B|C|9
9SUM|1|B|C|10
9SUM|1|B|A|11
9SUM|1|B|U|12
9SUM|1|B|U|13
9SUM|1|B|C|14
*
9SUM|1|B|G|67
9SUM|1|B|G|68
*
9SUM|1|B|U|112
9SUM|1|B|G|113
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain G
- 60S ribosomal protein L5
- Chain L
- 60S ribosomal protein L10
- Chain V
- 60S ribosomal protein L21-A
Coloring options: