J3_9SYH_016
3D structure
- PDB id
- 9SYH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome from deltaRlmE strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.89 Å
Loop
- Sequence
- UAU*AGACUGC*GAGGAAGGUG
- Length
- 20 nucleotides
- Bulged bases
- 9SYH|1|A|U|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SYH|1|A|U|1116
9SYH|1|A|A|1117
9SYH|1|A|U|1118
*
9SYH|1|A|A|1155
9SYH|1|A|G|1156
9SYH|1|A|A|1157
9SYH|1|A|C|1158
9SYH|1|A|U|1159
9SYH|1|A|G|1160
9SYH|1|A|C|1161
*
9SYH|1|A|G|1175
9SYH|1|A|A|1176
9SYH|1|A|G|1177
9SYH|1|A|G|1178
9SYH|1|A|A|1179
9SYH|1|A|A|1180
9SYH|1|A|G|1181
9SYH|1|A|G|1182
9SYH|1|A|U|1183
9SYH|1|A|G|1184
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain B
- Small ribosomal subunit protein uS2
- Chain G
- Small ribosomal subunit protein uS7
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14
Coloring options: