J3_9SYR_019

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

UAUC*GU(PSU)*ACUAAUA

Length

14 nucleotides

Bulged bases

9SYR|1|L1|A|4464, 9SYR|1|L1|U|4465

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|U|4463
9SYR|1|L1|A|4464
9SYR|1|L1|U|4465
9SYR|1|L1|C|4466
*
9SYR|1|L1|G|4491
9SYR|1|L1|U|4492
9SYR|1|L1|PSU|4493
*
9SYR|1|L1|A|4507
9SYR|1|L1|C|4508
9SYR|1|L1|U|4509
9SYR|1|L1|A|4510
9SYR|1|L1|A|4511
9SYR|1|L1|U|4512
9SYR|1|L1|A|4513

Current chains

Chain L1

28S rRNA

Nearby chains

Chain Lb

60S ribosomal protein L3

Chain Lm

60S ribosomal protein L23