J3_9SYR_027

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

AGAG*CAG*CUGGAU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|A|816
9SYR|1|S1|G|817
9SYR|1|S1|A|818
9SYR|1|S1|G|819
*
9SYR|1|S1|C|829
9SYR|1|S1|A|830
9SYR|1|S1|G|831
*
9SYR|1|S1|C|843
9SYR|1|S1|U|844
9SYR|1|S1|G|845
9SYR|1|S1|G|846
9SYR|1|S1|A|847
9SYR|1|S1|U|848

Current chains

Chain S1

18S rRNA

Nearby chains

Chain SB

40S ribosomal protein S9

Chain Sh

Isoform 3 of Small ribosomal subunit protein eS24

Chain Sw

Small ribosomal subunit protein eS4, X isoform