J3_9SYR_031
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- UGGA*UAC*G(G7M)AA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: G7M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SYR|1|S1|U|1225
9SYR|1|S1|G|1226
9SYR|1|S1|G|1227
9SYR|1|S1|A|1228
*
9SYR|1|S1|U|1530
9SYR|1|S1|A|1531
9SYR|1|S1|C|1532
*
9SYR|1|S1|G|1638
9SYR|1|S1|G7M|1639
9SYR|1|S1|A|1640
9SYR|1|S1|A|1641
Current chains
- Chain S1
- 18S rRNA
Nearby chains
- Chain S3
- Transfer RNA; tRNA
- Chain SC
- 40S ribosomal protein S5
- Chain Sc
- 40S ribosomal protein S16
- Chain Sd
- Small ribosomal subunit protein uS13
- Chain Si
- Small ribosomal subunit protein eS19
- Chain Sm
- 40S ribosomal protein S25
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