J3_9SYR_036
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- (OMC)UGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 9SYR|1|S1|U|1477
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SYR|1|S1|OMC|1391
9SYR|1|S1|U|1392
9SYR|1|S1|G|1393
9SYR|1|S1|G|1394
9SYR|1|S1|C|1395
*
9SYR|1|S1|G|1450
9SYR|1|S1|G|1451
9SYR|1|S1|A|1452
9SYR|1|S1|C|1453
9SYR|1|S1|A|1454
9SYR|1|S1|A|1455
9SYR|1|S1|G|1456
*
9SYR|1|S1|C|1470
9SYR|1|S1|C|1471
9SYR|1|S1|C|1472
9SYR|1|S1|G|1473
9SYR|1|S1|A|1474
9SYR|1|S1|G|1475
9SYR|1|S1|A|1476
9SYR|1|S1|U|1477
9SYR|1|S1|U|1478
9SYR|1|S1|G|1479
Current chains
- Chain S1
- 18S rRNA
Nearby chains
- Chain SC
- 40S ribosomal protein S5
- Chain Sb
- 40S ribosomal protein S17
- Chain Sc
- 40S ribosomal protein S16
- Chain Sl
- 40S ribosomal protein S20
- Chain Sp
- 40S ribosomal protein S29
- Chain Ss
- Receptor of activated protein C kinase 1
- Chain Sx
- 40S ribosomal protein S3
Coloring options: