J3_9T4R_012

3D structure

PDB id

9T4R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S initiation complex with a natural mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

UUGACAAC*GCCUUC*GACA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T4R|1|A|U|1010
9T4R|1|A|U|1011
9T4R|1|A|G|1012
9T4R|1|A|A|1013
9T4R|1|A|C|1014
9T4R|1|A|A|1015
9T4R|1|A|A|1016
9T4R|1|A|C|1017
*
9T4R|1|A|G|1030
9T4R|1|A|C|1031
9T4R|1|A|C|1032
9T4R|1|A|U|1033
9T4R|1|A|U|1034
9T4R|1|A|C|1035
*
9T4R|1|A|G|1046
9T4R|1|A|A|1047
9T4R|1|A|C|1048
9T4R|1|A|A|1049

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

Small ribosomal subunit protein uS3

Chain N

Small ribosomal subunit protein uS14B