J3_9T61_010
3D structure
- PDB id
- 9T61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Doxycycline Bound C. burnetii 30S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- CUUG*CAG*CUUACG
- Length
- 13 nucleotides
- Bulged bases
- 9T61|1|A|U|1209, 9T61|1|A|C|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9T61_010 not in the Motif Atlas
- Geometric match to J3_8B0X_008
- Geometric discrepancy: 0.1192
- The information below is about J3_8B0X_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_84394.1
- Basepair signature
- cWW-tWH-F-F-cWW-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
9T61|1|A|C|986
9T61|1|A|U|987
9T61|1|A|U|988
9T61|1|A|G|989
*
9T61|1|A|C|1041
9T61|1|A|A|1042
9T61|1|A|G|1043
*
9T61|1|A|C|1207
9T61|1|A|U|1208
9T61|1|A|U|1209
9T61|1|A|A|1210
9T61|1|A|C|1211
9T61|1|A|G|1212
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain N
- Small ribosomal subunit protein uS14
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