J3_9T6M_017

3D structure

PDB id

9T6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

CAAUG*CGUAGUCC*GUCG

Length

17 nucleotides

Bulged bases

9T6M|1|A|U|1240, 9T6M|1|A|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T6M|1|A|C|1237
9T6M|1|A|A|1238
9T6M|1|A|A|1239
9T6M|1|A|U|1240
9T6M|1|A|G|1241
*
9T6M|1|A|C|1296
9T6M|1|A|G|1297
9T6M|1|A|U|1298
9T6M|1|A|A|1299
9T6M|1|A|G|1300
9T6M|1|A|U|1301
9T6M|1|A|C|1302
9T6M|1|A|C|1303
*
9T6M|1|A|G|1334
9T6M|1|A|U|1335
9T6M|1|A|C|1336
9T6M|1|A|G|1337

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

Small ribosomal subunit protein uS7

Chain M

Small ribosomal subunit protein uS13