J3_9T6M_031

3D structure

PDB id

9T6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

CUA*UAG*CAUAAG

Length

12 nucleotides

Bulged bases

9T6M|1|a|U|2334, 9T6M|1|a|A|2336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T6M|1|a|C|2295
9T6M|1|a|U|2296
9T6M|1|a|A|2297
*
9T6M|1|a|U|2321
9T6M|1|a|A|2322
9T6M|1|a|G|2323
*
9T6M|1|a|C|2332
9T6M|1|a|A|2333
9T6M|1|a|U|2334
9T6M|1|a|A|2335
9T6M|1|a|A|2336
9T6M|1|a|G|2337

Current chains

Chain a

23S rRNA

Nearby chains

Chain Z

Transfer RNA; tRNA

Chain b

5S ribosomal RNA; 5S rRNA

Chain f

Large ribosomal subunit protein uL5

Chain n

Large ribosomal subunit protein uL18

Chain v

Large ribosomal subunit protein bL27