J3_9TEY_017

3D structure

PDB id

9TEY (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDro bound to the terminating Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CAAUG*CGUAGUCC*GUCG

Length

17 nucleotides

Bulged bases

9TEY|1|A|U|1240, 9TEY|1|A|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9TEY_017 not in the Motif Atlas

Homologous match to J3_6CZR_026

Geometric discrepancy: 0.2029

The information below is about J3_6CZR_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_37047.5

Basepair signature

cWW-cSS-tHW-F-F-F-cWW-cWW-cSH-cSH-F

Number of instances in this motif group

5

Unit IDs

9TEY|1|A|C|1237
9TEY|1|A|A|1238
9TEY|1|A|A|1239
9TEY|1|A|U|1240
9TEY|1|A|G|1241
*
9TEY|1|A|C|1296
9TEY|1|A|G|1297
9TEY|1|A|U|1298
9TEY|1|A|A|1299
9TEY|1|A|G|1300
9TEY|1|A|U|1301
9TEY|1|A|C|1302
9TEY|1|A|C|1303
*
9TEY|1|A|G|1334
9TEY|1|A|U|1335
9TEY|1|A|C|1336
9TEY|1|A|G|1337

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S7

Chain M

Small ribosomal subunit protein uS13