J3_9TI5_008
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CAG*CGAAC*GAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9TI5_008 not in the Motif Atlas
- Homologous match to J3_7A0S_005
- Geometric discrepancy: 0.1039
- The information below is about J3_7A0S_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_69816.3
- Basepair signature
- cWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 11
Unit IDs
9TI5|1|A|C|743
9TI5|1|A|A|744
9TI5|1|A|G|745
*
9TI5|1|A|C|777
9TI5|1|A|G|778
9TI5|1|A|A|779
9TI5|1|A|A|780
9TI5|1|A|C|781
*
9TI5|1|A|G|805
9TI5|1|A|A|806
9TI5|1|A|U|807
9TI5|1|A|G|808
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L2
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