J3_9TI8_011
3D structure
- PDB id
- 9TI8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 50S ribosome in complex with RRF, EF-G and fusidic acid (50S-RRF-EF-G-FA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.18 Å
Loop
- Sequence
- CUAAG*CGCAAAC*GUAG
- Length
- 16 nucleotides
- Bulged bases
- 9TI8|1|A|A|1653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9TI8_011 not in the Motif Atlas
- Geometric match to J3_4WF9_005
- Geometric discrepancy: 0.0821
- The information below is about J3_4WF9_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_68164.1
- Basepair signature
- cWW-tSH-F-F-tHW-F-F-cWW-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
9TI8|1|A|C|1342
9TI8|1|A|U|1343
9TI8|1|A|A|1344
9TI8|1|A|A|1345
9TI8|1|A|G|1346
*
9TI8|1|A|C|1649
9TI8|1|A|G|1650
9TI8|1|A|C|1651
9TI8|1|A|A|1652
9TI8|1|A|A|1653
9TI8|1|A|A|1654
9TI8|1|A|C|1655
*
9TI8|1|A|G|1664
9TI8|1|A|U|1665
9TI8|1|A|A|1666
9TI8|1|A|G|1667
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L34
Coloring options: