J3_9TI9_023
3D structure
- PDB id
- 9TI9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- CGG*CUUGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- 9TI9|1|a|U|661
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9TI9_023 not in the Motif Atlas
- Homologous match to J3_6CZR_077
- Geometric discrepancy: 0.2894
- The information below is about J3_6CZR_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.3
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
9TI9|1|a|C|594
9TI9|1|a|G|595
9TI9|1|a|G|596
*
9TI9|1|a|C|659
9TI9|1|a|U|660
9TI9|1|a|U|661
9TI9|1|a|G|662
9TI9|1|a|A|663
*
9TI9|1|a|U|759
9TI9|1|a|G|760
9TI9|1|a|A|761
9TI9|1|a|C|762
9TI9|1|a|G|763
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S8
- Chain m
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S15
- Chain r
- 30S ribosomal protein S17
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