J3_9TKO_006
3D structure
- PDB id
- 9TKO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S pre-initiation complex with IF2 bound (30S PIC-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 9TKO|1|D1|U|871, 9TKO|1|D1|A|873
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKO|1|D1|C|826
9TKO|1|D1|U|827
9TKO|1|D1|U|828
9TKO|1|D1|G|829
*
9TKO|1|D1|C|857
9TKO|1|D1|G|858
9TKO|1|D1|G|859
9TKO|1|D1|A|860
9TKO|1|D1|G|861
*
9TKO|1|D1|C|868
9TKO|1|D1|G|869
9TKO|1|D1|U|870
9TKO|1|D1|U|871
9TKO|1|D1|A|872
9TKO|1|D1|A|873
9TKO|1|D1|G|874
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AA
- Small ribosomal subunit protein uS2
- Chain AG
- Small ribosomal subunit protein uS8
- Chain AU
- Small ribosomal subunit protein bS21
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