J3_9TKO_007
3D structure
- PDB id
- 9TKO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S pre-initiation complex with IF2 bound (30S PIC-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAAG*CUAGUAA*UGAAUACG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKO|1|D1|C|936
9TKO|1|D1|A|937
9TKO|1|D1|A|938
9TKO|1|D1|G|939
*
9TKO|1|D1|C|1344
9TKO|1|D1|U|1345
9TKO|1|D1|A|1346
9TKO|1|D1|G|1347
9TKO|1|D1|U|1348
9TKO|1|D1|A|1349
9TKO|1|D1|A|1350
*
9TKO|1|D1|U|1372
9TKO|1|D1|G|1373
9TKO|1|D1|A|1374
9TKO|1|D1|A|1375
9TKO|1|D1|U|1376
9TKO|1|D1|A|1377
9TKO|1|D1|C|1378
9TKO|1|D1|G|1379
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AF
- Small ribosomal subunit protein uS7
- Chain AH
- Small ribosomal subunit protein uS9
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