J3_9TKO_009
3D structure
- PDB id
- 9TKO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S pre-initiation complex with IF2 bound (30S PIC-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 9TKO|1|D1|A|975, 9TKO|1|D1|G|976, 9TKO|1|D1|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKO|1|D1|U|955
9TKO|1|D1|U|956
9TKO|1|D1|U|957
9TKO|1|D1|A|958
9TKO|1|D1|A|959
9TKO|1|D1|U|960
9TKO|1|D1|U|961
9TKO|1|D1|C|962
*
9TKO|1|D1|G|973
9TKO|1|D1|A|974
9TKO|1|D1|A|975
9TKO|1|D1|G|976
9TKO|1|D1|A|977
9TKO|1|D1|A|978
9TKO|1|D1|C|979
9TKO|1|D1|C|980
9TKO|1|D1|U|981
9TKO|1|D1|U|982
9TKO|1|D1|A|983
9TKO|1|D1|C|984
*
9TKO|1|D1|G|1221
9TKO|1|D1|G|1222
9TKO|1|D1|C|1223
9TKO|1|D1|U|1224
9TKO|1|D1|A|1225
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AI
- Small ribosomal subunit protein uS10
- Chain AL
- Small ribosomal subunit protein uS13
- Chain AM
- Small ribosomal subunit protein uS14
- Chain AR
- Small ribosomal subunit protein uS19
Coloring options: