J3_9TKO_010

3D structure

PDB id

9TKO (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S pre-initiation complex with IF2 bound (30S PIC-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

9TKO|1|D1|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKO|1|D1|C|990
9TKO|1|D1|U|991
9TKO|1|D1|U|992
9TKO|1|D1|G|993
*
9TKO|1|D1|C|1045
9TKO|1|D1|A|1046
9TKO|1|D1|G|1047
*
9TKO|1|D1|C|1210
9TKO|1|D1|U|1211
9TKO|1|D1|U|1212
9TKO|1|D1|A|1213
9TKO|1|D1|C|1214
9TKO|1|D1|G|1215

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AM

Small ribosomal subunit protein uS14