J3_9TKO_017
3D structure
- PDB id
- 9TKO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S pre-initiation complex with IF2 bound (30S PIC-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAAUG*CGUAGUCC*GUCG
- Length
- 17 nucleotides
- Bulged bases
- 9TKO|1|D1|U|1240, 9TKO|1|D1|C|1302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKO|1|D1|C|1237
9TKO|1|D1|A|1238
9TKO|1|D1|A|1239
9TKO|1|D1|U|1240
9TKO|1|D1|G|1241
*
9TKO|1|D1|C|1296
9TKO|1|D1|G|1297
9TKO|1|D1|U|1298
9TKO|1|D1|A|1299
9TKO|1|D1|G|1300
9TKO|1|D1|U|1301
9TKO|1|D1|C|1302
9TKO|1|D1|C|1303
*
9TKO|1|D1|G|1334
9TKO|1|D1|U|1335
9TKO|1|D1|C|1336
9TKO|1|D1|G|1337
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AF
- Small ribosomal subunit protein uS7
- Chain AL
- Small ribosomal subunit protein uS13
Coloring options: