3D structure

PDB id
9TKR (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S elongation competent complex (70S EC)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GAAC*GUUGAU*AAUGAAC
Length
17 nucleotides
Bulged bases
9TKR|1|D2|U|2833, 9TKR|1|D2|A|2835
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9TKR|1|D2|G|2812
9TKR|1|D2|A|2813
9TKR|1|D2|A|2814
9TKR|1|D2|C|2815
*
9TKR|1|D2|G|2831
9TKR|1|D2|U|2832
9TKR|1|D2|U|2833
9TKR|1|D2|G|2834
9TKR|1|D2|A|2835
9TKR|1|D2|U|2836
*
9TKR|1|D2|A|2882
9TKR|1|D2|A|2883
9TKR|1|D2|U|2884
9TKR|1|D2|G|2885
9TKR|1|D2|A|2886
9TKR|1|D2|A|2887
9TKR|1|D2|C|2888

Current chains

Chain D2
23S Ribosomal RNA

Nearby chains

Chain B5
Large ribosomal subunit protein bL32
Chain BC
50S ribosomal protein L3
Chain BQ
Large ribosomal subunit protein bL17
Chain BV
Large ribosomal subunit protein uL22

Coloring options:

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