J3_9UZL_004
3D structure
- PDB id
- 9UZL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EMCV IRES captured on mammalian 40S ribosome with initiator tRNA and eIF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.01 Å
Loop
- Sequence
- UGGA*UUAAGAG*CAUUA
- Length
- 16 nucleotides
- Bulged bases
- 9UZL|1|2|G|917
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9UZL|1|2|U|672
9UZL|1|2|G|673
9UZL|1|2|G|674
9UZL|1|2|A|675
*
9UZL|1|2|U|913
9UZL|1|2|U|914
9UZL|1|2|A|915
9UZL|1|2|A|916
9UZL|1|2|G|917
9UZL|1|2|A|918
9UZL|1|2|G|919
*
9UZL|1|2|C|1015
9UZL|1|2|A|1016
9UZL|1|2|U|1017
9UZL|1|2|U|1018
9UZL|1|2|A|1019
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain J
- Small ribosomal subunit protein eS7
- Chain N
- Small ribosomal subunit protein uS17
- Chain P
- Small ribosomal subunit protein uS15
- Chain Y
- Small ribosomal subunit protein uS8
- Chain Z
- Small ribosomal subunit protein uS12
- Chain c
- Small ribosomal subunit protein eS27
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