J3_9UZM_009

3D structure

PDB id

9UZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

40S ribosome without initiation factors

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

UGGA*UAC*GGAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UZM|1|2|U|1221
9UZM|1|2|G|1222
9UZM|1|2|G|1223
9UZM|1|2|A|1224
*
9UZM|1|2|U|1525
9UZM|1|2|A|1526
9UZM|1|2|C|1527
*
9UZM|1|2|G|1633
9UZM|1|2|G|1634
9UZM|1|2|A|1635
9UZM|1|2|A|1636

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain H

Small ribosomal subunit protein uS7

Chain S

Small ribosomal subunit protein uS9

Chain U

Small ribosomal subunit protein uS13

Chain V

Small ribosomal subunit protein eS19

Chain h

Small ribosomal subunit protein eS25