J3_9UZM_011

3D structure

PDB id

9UZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

40S ribosome without initiation factors

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CGGAC*GGGUG*UUAGAUG

Length

17 nucleotides

Bulged bases

9UZM|1|2|G|1270, 9UZM|1|2|G|1503, 9UZM|1|2|U|1505

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UZM|1|2|C|1269
9UZM|1|2|G|1270
9UZM|1|2|G|1271
9UZM|1|2|A|1272
9UZM|1|2|C|1273
*
9UZM|1|2|G|1316
9UZM|1|2|G|1317
9UZM|1|2|G|1318
9UZM|1|2|U|1319
9UZM|1|2|G|1320
*
9UZM|1|2|U|1500
9UZM|1|2|U|1501
9UZM|1|2|A|1502
9UZM|1|2|G|1503
9UZM|1|2|A|1504
9UZM|1|2|U|1505
9UZM|1|2|G|1506

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain M

Small ribosomal subunit protein eS10

Chain e

Small ribosomal subunit protein uS14

Chain f

Ubiquitin-ribosomal protein eS31 fusion protein