J3_9UZM_014

3D structure

PDB id

9UZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

40S ribosome without initiation factors

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CUGGC*GGAC*GAUUG

Length

14 nucleotides

Bulged bases

9UZM|1|2|A|1472, 9UZM|1|2|U|1473

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UZM|1|2|C|1387
9UZM|1|2|U|1388
9UZM|1|2|G|1389
9UZM|1|2|G|1390
9UZM|1|2|C|1391
*
9UZM|1|2|G|1446
9UZM|1|2|G|1447
9UZM|1|2|A|1448
9UZM|1|2|C|1449
*
9UZM|1|2|G|1471
9UZM|1|2|A|1472
9UZM|1|2|U|1473
9UZM|1|2|U|1474
9UZM|1|2|G|1475

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain F

Small ribosomal subunit protein uS3

Chain H

Small ribosomal subunit protein uS7

Chain S

Small ribosomal subunit protein uS9

Chain T

Small ribosomal subunit protein eS17

Chain W

Small ribosomal subunit protein uS10

Chain e

Small ribosomal subunit protein uS14

Chain g

Small ribosomal subunit protein RACK1