J3_9W0N_015
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUAAU*AGGUUAG*CAUAAG
- Length
- 18 nucleotides
- Bulged bases
- 9W0N|1|1|U|2334, 9W0N|1|1|A|2336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9W0N|1|1|C|2295
9W0N|1|1|U|2296
9W0N|1|1|A|2297
9W0N|1|1|A|2298
9W0N|1|1|U|2299
*
9W0N|1|1|A|2317
9W0N|1|1|G|2318
9W0N|1|1|G|2319
9W0N|1|1|U|2320
9W0N|1|1|U|2321
9W0N|1|1|A|2322
9W0N|1|1|G|2323
*
9W0N|1|1|C|2332
9W0N|1|1|A|2333
9W0N|1|1|U|2334
9W0N|1|1|A|2335
9W0N|1|1|A|2336
9W0N|1|1|G|2337
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 2
- 5S ribosomal RNA; 5S rRNA
- Chain 5
- Transfer RNA; tRNA
- Chain e
- Large ribosomal subunit protein uL5
- Chain o
- Large ribosomal subunit protein uL18
- Chain w
- Large ribosomal subunit protein bL27
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