J3_9WNQ_012

3D structure

PDB id

9WNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GGAAGUU*AAUGUGC*GAACC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNQ|1|A|G|1002
9WNQ|1|A|G|1003
9WNQ|1|A|A|1004
9WNQ|1|A|A|1005
9WNQ|1|A|G|1006
9WNQ|1|A|U|1007
9WNQ|1|A|U|1008
*
9WNQ|1|A|A|1021
9WNQ|1|A|A|1022
9WNQ|1|A|U|1023
9WNQ|1|A|G|1024
9WNQ|1|A|U|1025
9WNQ|1|A|G|1026
9WNQ|1|A|C|1027
*
9WNQ|1|A|G|1034
9WNQ|1|A|A|1035
9WNQ|1|A|A|1036
9WNQ|1|A|C|1037
9WNQ|1|A|C|1038

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain N

30S ribosomal protein S14