J3_9WW5_006
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- CC*GAGGGAGCGAGACCCGUCGCCG*CACGGGG
- Length
- 31 nucleotides
- Bulged bases
- 9WW5|1|AA|C|962, 9WW5|1|AA|A|964, 9WW5|1|AA|G|965, 9WW5|1|AA|C|967, 9WW5|1|AA|C|968, 9WW5|1|AA|C|969, 9WW5|1|AA|U|971, 9WW5|1|AA|C|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW5|1|AA|C|712
9WW5|1|AA|C|713
*
9WW5|1|AA|G|955
9WW5|1|AA|A|956
9WW5|1|AA|G|957
9WW5|1|AA|G|958
9WW5|1|AA|G|959
9WW5|1|AA|A|960
9WW5|1|AA|G|961
9WW5|1|AA|C|962
9WW5|1|AA|G|963
9WW5|1|AA|A|964
9WW5|1|AA|G|965
9WW5|1|AA|A|966
9WW5|1|AA|C|967
9WW5|1|AA|C|968
9WW5|1|AA|C|969
9WW5|1|AA|G|970
9WW5|1|AA|U|971
9WW5|1|AA|C|972
9WW5|1|AA|G|973
9WW5|1|AA|C|974
9WW5|1|AA|C|975
9WW5|1|AA|G|976
*
9WW5|1|AA|C|1278
9WW5|1|AA|A|1279
9WW5|1|AA|C|1280
9WW5|1|AA|G|1281
9WW5|1|AA|G|1282
9WW5|1|AA|G|1283
9WW5|1|AA|G|1284
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AF
- Large ribosomal subunit protein uL4
- Chain AH
- Large ribosomal subunit protein eL6
- Chain AI
- 60S ribosomal protein L7
- Chain Ag
- 60S ribosomal protein L32
Coloring options: