J3_9Y49_013

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAAGUG*CAA*UCUG

Length

14 nucleotides

Bulged bases

9Y49|1|A6|A|2396, 9Y49|1|A6|U|2398

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|C|2393
9Y49|1|A6|G|2394
9Y49|1|A6|A|2395
9Y49|1|A6|A|2396
9Y49|1|A6|G|2397
9Y49|1|A6|U|2398
9Y49|1|A6|G|2399
*
9Y49|1|A6|C|2805
9Y49|1|A6|A|2806
9Y49|1|A6|A|2807
*
9Y49|1|A6|U|2819
9Y49|1|A6|C|2820
9Y49|1|A6|U|2821
9Y49|1|A6|G|2822

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain A5

Large subunit ribosomal RNA; LSU rRNA

Chain CR

Large ribosomal subunit protein eL19

Chain Cg

60S ribosomal protein L34