J3_9Y4G_007

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUCUCC*GGC*GG

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A5|C|1099
9Y4G|1|A5|U|1100
9Y4G|1|A5|C|1101
9Y4G|1|A5|U|1102
9Y4G|1|A5|C|1103
9Y4G|1|A5|C|1104
*
9Y4G|1|A5|G|1165
9Y4G|1|A5|G|1166
9Y4G|1|A5|C|1167
*
9Y4G|1|A5|G|1195
9Y4G|1|A5|G|1196

Current chains

Chain A5

LSU-alpha rRNA

Nearby chains

Chain CD

60S ribosomal protein L5