J3_9Y4G_011

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GACG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

9Y4G|1|A5|U|1997, 9Y4G|1|A5|A|1998

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A5|G|1969
9Y4G|1|A5|A|1970
9Y4G|1|A5|C|1971
9Y4G|1|A5|G|1972
*
9Y4G|1|A5|C|1994
9Y4G|1|A5|G|1995
9Y4G|1|A5|C|1996
9Y4G|1|A5|U|1997
9Y4G|1|A5|A|1998
9Y4G|1|A5|A|1999
9Y4G|1|A5|G|2000
9Y4G|1|A5|G|2001
*
9Y4G|1|A5|C|2016
9Y4G|1|A5|A|2017
9Y4G|1|A5|C|2018

Current chains

Chain A5

LSU-alpha rRNA

Nearby chains