J3_9Y4G_042
3D structure
- PDB id
- 9Y4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 9Y4G|1|B2|A|1454, 9Y4G|1|B2|A|1476, 9Y4G|1|B2|U|1477
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y4G|1|B2|C|1391
9Y4G|1|B2|U|1392
9Y4G|1|B2|G|1393
9Y4G|1|B2|G|1394
9Y4G|1|B2|C|1395
*
9Y4G|1|B2|G|1450
9Y4G|1|B2|G|1451
9Y4G|1|B2|A|1452
9Y4G|1|B2|C|1453
9Y4G|1|B2|A|1454
9Y4G|1|B2|A|1455
9Y4G|1|B2|G|1456
*
9Y4G|1|B2|C|1470
9Y4G|1|B2|C|1471
9Y4G|1|B2|C|1472
9Y4G|1|B2|G|1473
9Y4G|1|B2|A|1474
9Y4G|1|B2|G|1475
9Y4G|1|B2|A|1476
9Y4G|1|B2|U|1477
9Y4G|1|B2|U|1478
9Y4G|1|B2|G|1479
Current chains
- Chain B2
- 18S ribosomal RNA
Nearby chains
- Chain AD
- 40S ribosomal protein S3
- Chain AF
- 40S ribosomal protein S5
- Chain AQ
- 40S ribosomal protein S16
- Chain AR
- 40S ribosomal protein S17
- Chain AU
- 40S ribosomal protein S20
- Chain Ad
- 40S ribosomal protein S29
- Chain Ag
- Guanine nucleotide-binding protein subunit beta-2-like 1
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