J3_9Y79_005
3D structure
- PDB id
- 9Y79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAGAAU*GGAAUACCGGUGG*CGG
- Length
- 22 nucleotides
- Bulged bases
- 9Y79|1|D|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y79|1|D|U|672
9Y79|1|D|A|673
9Y79|1|D|G|674
9Y79|1|D|A|675
9Y79|1|D|A|676
9Y79|1|D|U|677
*
9Y79|1|D|G|713
9Y79|1|D|G|714
9Y79|1|D|A|715
9Y79|1|D|A|716
9Y79|1|D|U|717
9Y79|1|D|A|718
9Y79|1|D|C|719
9Y79|1|D|C|720
9Y79|1|D|G|721
9Y79|1|D|G|722
9Y79|1|D|U|723
9Y79|1|D|G|724
9Y79|1|D|G|725
*
9Y79|1|D|C|732
9Y79|1|D|G|733
9Y79|1|D|G|734
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain C
- Small ribosomal subunit protein bS18
- Chain F
- Small ribosomal subunit protein bS21
- Chain H
- Small ribosomal subunit protein bS1
- Chain L
- Small ribosomal subunit protein bS6
- Chain Q
- 30S ribosomal protein S11
- Chain T
- Small ribosomal subunit protein uS15
- Chain h
- 50S ribosomal protein L2
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