J3_9Y79_033
3D structure
- PDB id
- 9Y79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 9Y79|1|a|U|2833, 9Y79|1|a|A|2835, 9Y79|1|a|U|2884, 9Y79|1|a|G|2885
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y79|1|a|G|2812
9Y79|1|a|A|2813
9Y79|1|a|A|2814
9Y79|1|a|C|2815
*
9Y79|1|a|G|2831
9Y79|1|a|U|2832
9Y79|1|a|U|2833
9Y79|1|a|G|2834
9Y79|1|a|A|2835
9Y79|1|a|U|2836
*
9Y79|1|a|A|2882
9Y79|1|a|A|2883
9Y79|1|a|U|2884
9Y79|1|a|G|2885
9Y79|1|a|A|2886
9Y79|1|a|A|2887
9Y79|1|a|C|2888
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L22
- Chain i
- 50S ribosomal protein L32
- Chain j
- 50S ribosomal protein L3
- Chain w
- Large ribosomal subunit protein bL17
Coloring options: