J3_9YPG_034
3D structure
- PDB id
- 9YPG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- GTPBP1*GCP*Phe-tRNA*ribosome in the GTPase activation-like state, Structure III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CCAG*CCAGUAA*UGAUUAAG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YPG|1|9|C|1218
9YPG|1|9|C|1219
9YPG|1|9|A|1220
9YPG|1|9|G|1221
*
9YPG|1|9|C|1645
9YPG|1|9|C|1646
9YPG|1|9|A|1647
9YPG|1|9|G|1648
9YPG|1|9|U|1649
9YPG|1|9|A|1650
9YPG|1|9|A|1651
*
9YPG|1|9|U|1673
9YPG|1|9|G|1674
9YPG|1|9|A|1675
9YPG|1|9|U|1676
9YPG|1|9|U|1677
9YPG|1|9|A|1678
9YPG|1|9|A|1679
9YPG|1|9|G|1680
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain 11
- Transfer RNA; tRNA
- Chain FF
- Ribosomal protein S5
- Chain QQ
- uS9
- Chain cc
- Ribosomal protein S28
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