J3_9YQ0_034
3D structure
- PDB id
- 9YQ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Vacant ribosome with P-site tRNA, substate 2, Structure Ib
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCAG*CCAGUAA*UGAUUAAG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YQ0|1|9|C|1218
9YQ0|1|9|C|1219
9YQ0|1|9|A|1220
9YQ0|1|9|G|1221
*
9YQ0|1|9|C|1645
9YQ0|1|9|C|1646
9YQ0|1|9|A|1647
9YQ0|1|9|G|1648
9YQ0|1|9|U|1649
9YQ0|1|9|A|1650
9YQ0|1|9|A|1651
*
9YQ0|1|9|U|1673
9YQ0|1|9|G|1674
9YQ0|1|9|A|1675
9YQ0|1|9|U|1676
9YQ0|1|9|U|1677
9YQ0|1|9|A|1678
9YQ0|1|9|A|1679
9YQ0|1|9|G|1680
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain 11
- Transfer RNA; tRNA
- Chain FF
- Ribosomal protein S5
- Chain QQ
- uS9
- Chain cc
- Ribosomal protein S28
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