J3_9YQ1_032

3D structure

PDB id

9YQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 3, Structure Ic

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUC*GGACCAGAG*CAUUU

Length

18 nucleotides

Bulged bases

9YQ1|1|9|G|991

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ1|1|9|A|938
9YQ1|1|9|U|939
9YQ1|1|9|U|940
9YQ1|1|9|C|941
*
9YQ1|1|9|G|985
9YQ1|1|9|G|986
9YQ1|1|9|A|987
9YQ1|1|9|C|988
9YQ1|1|9|C|989
9YQ1|1|9|A|990
9YQ1|1|9|G|991
9YQ1|1|9|A|992
9YQ1|1|9|G|993
*
9YQ1|1|9|C|1000
9YQ1|1|9|A|1001
9YQ1|1|9|U|1002
9YQ1|1|9|U|1003
9YQ1|1|9|U|1004

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain BB

40S ribosomal protein S3a

Chain NN

Ribosomal protein S13

Chain OO

Small ribosomal subunit protein uS11

Chain aa

40S ribosomal protein S26

Chain p

eL43