J3_9ZTL_011

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

9ZTL|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9ZTL_011 not in the Motif Atlas

Homologous match to J3_6CZR_063

Geometric discrepancy: 0.2052

The information below is about J3_6CZR_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.1

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

3

Unit IDs

9ZTL|1|A|C|990
9ZTL|1|A|U|991
9ZTL|1|A|U|992
9ZTL|1|A|G|993
9ZTL|1|A|A|994
9ZTL|1|A|C|995
9ZTL|1|A|A|996
9ZTL|1|A|U|997
*
9ZTL|1|A|A|1044
9ZTL|1|A|C|1045
9ZTL|1|A|A|1046
9ZTL|1|A|G|1047
*
9ZTL|1|A|C|1210
9ZTL|1|A|U|1211
9ZTL|1|A|U|1212
9ZTL|1|A|A|1213
9ZTL|1|A|C|1214
9ZTL|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14