J3_9ZTL_022

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

9ZTL|1|a|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9ZTL_022 not in the Motif Atlas

Geometric match to J3_8B0X_034

Geometric discrepancy: 0.0791

The information below is about J3_8B0X_034

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_77124.1

Basepair signature

cWW-tSH-cHH-cSW-F-tHS-cWW-cWW-F-F-cWW-F

Number of instances in this motif group

4

Unit IDs

9ZTL|1|a|G|297
9ZTL|1|a|G|298
9ZTL|1|a|A|299
9ZTL|1|a|A|300
9ZTL|1|a|G|301
*
9ZTL|1|a|C|316
9ZTL|1|a|G|317
9ZTL|1|a|C|318
9ZTL|1|a|G|319
9ZTL|1|a|A|320
9ZTL|1|a|U|321
9ZTL|1|a|A|322
9ZTL|1|a|C|323
9ZTL|1|a|A|324
9ZTL|1|a|G|325
*
9ZTL|1|a|C|337
9ZTL|1|a|G|338
9ZTL|1|a|U|339
9ZTL|1|a|A|340
9ZTL|1|a|C|341

Current chains

Chain a

23s rRNA

Nearby chains

Chain e

Large ribosomal subunit protein uL4

Chain t

50S ribosomal protein L24