J3_9ZTL_028

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9ZTL_028 not in the Motif Atlas

Homologous match to J3_7A0S_019

Geometric discrepancy: 0.1201

The information below is about J3_7A0S_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.3

Basepair signature

cWW-tSH-tSH-tHH-F-F-cWW-F-cWW

Number of instances in this motif group

4

Unit IDs

9ZTL|1|a|G|1424
9ZTL|1|a|G|1425
9ZTL|1|a|G|1426
9ZTL|1|a|A|1427
9ZTL|1|a|C|1428
9ZTL|1|a|G|1429
*
9ZTL|1|a|C|1564
9ZTL|1|a|C|1565
*
9ZTL|1|a|G|1568
9ZTL|1|a|A|1569
9ZTL|1|a|A|1570
9ZTL|1|a|A|1571
9ZTL|1|a|A|1572
9ZTL|1|a|G|1573
9ZTL|1|a|C|1574

Current chains

Chain a

23s rRNA

Nearby chains

Chain c

50S ribosomal protein L2