J4_10FZ_001

3D structure

PDB id

10FZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit from E. coli missing the gene encoding for the 16S rRNA 2'-O-methyltransferase RsmI

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GAGUAAUG*UG*CUAG*CC

Length

16 nucleotides

Bulged bases

10FZ|1|A|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

10FZ|1|A|G|115
10FZ|1|A|A|116
10FZ|1|A|G|117
10FZ|1|A|U|118
10FZ|1|A|A|119
10FZ|1|A|A|120
10FZ|1|A|U|121
10FZ|1|A|G|122
*
10FZ|1|A|U|239
10FZ|1|A|G|240
*
10FZ|1|A|C|286
10FZ|1|A|U|287
10FZ|1|A|A|288
10FZ|1|A|G|289
*
10FZ|1|A|C|311
10FZ|1|A|C|312

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain Q

Small ribosomal subunit protein uS17