J4_10QM_003

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

10QM|1|I|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

10QM|1|I|C|601
10QM|1|I|A|602
10QM|1|I|A|603
10QM|1|I|G|604
*
10QM|1|I|C|624
10QM|1|I|G|625
10QM|1|I|A|626
10QM|1|I|A|627
10QM|1|I|G|628
*
10QM|1|I|C|635
10QM|1|I|G|636
10QM|1|I|A|637
10QM|1|I|G|638
*
10QM|1|I|C|650
10QM|1|I|G|651
10QM|1|I|U|652
10QM|1|I|U|653
10QM|1|I|A|654
10QM|1|I|A|655
10QM|1|I|G|656

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain M

Large ribosomal subunit protein uL4

Chain T

Large ribosomal subunit protein uL15

Chain l

Large ribosomal subunit protein bL35