J4_11AA_001
3D structure
- PDB id
- 11AA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast co-transcriptional pre-60S assembly intermediate Nop12 RNP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UC*GAGUCG*CUAAGUG*UAAA
- Length
- 19 nucleotides
- Bulged bases
- 11AA|1|1|U|298
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11AA|1|1|U|112
11AA|1|1|C|113
*
11AA|1|1|G|267
11AA|1|1|A|268
11AA|1|1|G|269
11AA|1|1|U|270
11AA|1|1|C|271
11AA|1|1|G|272
*
11AA|1|1|C|293
11AA|1|1|U|294
11AA|1|1|A|295
11AA|1|1|A|296
11AA|1|1|G|297
11AA|1|1|U|298
11AA|1|1|G|299
*
11AA|1|1|U|316
11AA|1|1|A|317
11AA|1|1|A|318
11AA|1|1|A|319
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain L
- 60S ribosomal protein L13-A
- Chain N
- 60S ribosomal protein L15-A
- Chain b
- Ribosome biogenesis protein BRX1
- Chain i
- 60S ribosomal protein L36-A
- Chain p
- ATP-dependent RNA helicase HAS1
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