J4_11BQ_002

3D structure

PDB id

11BQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

11BQ|1|A|C|183, 11BQ|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11BQ|1|A|G|142
11BQ|1|A|A|143
11BQ|1|A|G|144
*
11BQ|1|A|C|178
11BQ|1|A|A|179
11BQ|1|A|U|180
11BQ|1|A|A|181
11BQ|1|A|A|182
11BQ|1|A|C|183
11BQ|1|A|G|184
*
11BQ|1|A|C|193
11BQ|1|A|C|194
11BQ|1|A|A|195
11BQ|1|A|A|196
11BQ|1|A|A|197
11BQ|1|A|G|198
*
11BQ|1|A|U|219
11BQ|1|A|G|220
11BQ|1|A|C|221

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20