J4_11BQ_014

3D structure

PDB id

11BQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGGC*GAC*GGAAG*UGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11BQ|1|a|G|2643
11BQ|1|a|G|2644
11BQ|1|a|G|2645
11BQ|1|a|C|2646
*
11BQ|1|a|G|2674
11BQ|1|a|A|2675
11BQ|1|a|C|2676
*
11BQ|1|a|G|2731
11BQ|1|a|G|2732
11BQ|1|a|A|2733
11BQ|1|a|A|2734
11BQ|1|a|G|2735
*
11BQ|1|a|U|2769
11BQ|1|a|G|2770
11BQ|1|a|C|2771

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain i

Large ribosomal subunit protein uL13

Chain j

Large ribosomal subunit protein uL14