J4_11EL_002

3D structure

PDB id

11EL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAG*CAUAACC*GCAAAG*CGC

Length

19 nucleotides

Bulged bases

11EL|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11EL|1|A|G|142
11EL|1|A|A|143
11EL|1|A|G|144
*
11EL|1|A|C|178
11EL|1|A|A|179
11EL|1|A|U|180
11EL|1|A|A|181
11EL|1|A|A|182
11EL|1|A|C|183
11EL|1|A|C|184
*
11EL|1|A|G|193
11EL|1|A|C|194
11EL|1|A|A|195
11EL|1|A|A|196
11EL|1|A|A|197
11EL|1|A|G|198
*
11EL|1|A|C|219
11EL|1|A|G|220
11EL|1|A|C|221

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20