J4_11FV_002

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUG*CAUACGU*AGAAAG*CGC

Length

19 nucleotides

Bulged bases

11FV|1|C|G|177, 11FV|1|C|A|191

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11FV|1|C|G|136
11FV|1|C|U|137
11FV|1|C|G|138
*
11FV|1|C|C|172
11FV|1|C|A|173
11FV|1|C|U|174
11FV|1|C|A|175
11FV|1|C|C|176
11FV|1|C|G|177
11FV|1|C|U|178
*
11FV|1|C|A|187
11FV|1|C|G|188
11FV|1|C|A|189
11FV|1|C|A|190
11FV|1|C|A|191
11FV|1|C|G|192
*
11FV|1|C|C|213
11FV|1|C|G|214
11FV|1|C|C|215

Current chains

Chain C

16S ribosomal RNA

Nearby chains

Chain 2

Small ribosomal subunit protein bS20