J4_11FV_006

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

11FV|1|I|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11FV|1|I|C|601
11FV|1|I|A|602
11FV|1|I|A|603
11FV|1|I|G|604
*
11FV|1|I|C|624
11FV|1|I|G|625
11FV|1|I|A|626
11FV|1|I|A|627
11FV|1|I|G|628
*
11FV|1|I|C|635
11FV|1|I|G|636
11FV|1|I|A|637
11FV|1|I|G|638
*
11FV|1|I|C|650
11FV|1|I|G|651
11FV|1|I|U|652
11FV|1|I|U|653
11FV|1|I|A|654
11FV|1|I|A|655
11FV|1|I|G|656

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain M

Large ribosomal subunit protein uL4

Chain T

Large ribosomal subunit protein uL15

Chain l

50S ribosomal protein L35