J4_11GG_002

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

UGGGGGAUAAC*GCUAAUACCGCAUACGUCC*GGAGAAAG*CG

Length

40 nucleotides

Bulged bases

11GG|1|C|A|168, 11GG|1|C|C|169, 11GG|1|C|C|170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|C|U|137
11GG|1|C|G|138
11GG|1|C|G|139
11GG|1|C|G|140
11GG|1|C|G|141
11GG|1|C|G|142
11GG|1|C|A|143
11GG|1|C|U|144
11GG|1|C|A|145
11GG|1|C|A|146
11GG|1|C|C|147
*
11GG|1|C|G|162
11GG|1|C|C|163
11GG|1|C|U|164
11GG|1|C|A|165
11GG|1|C|A|166
11GG|1|C|U|167
11GG|1|C|A|168
11GG|1|C|C|169
11GG|1|C|C|170
11GG|1|C|G|171
11GG|1|C|C|172
11GG|1|C|A|173
11GG|1|C|U|174
11GG|1|C|A|175
11GG|1|C|C|176
11GG|1|C|G|177
11GG|1|C|U|178
11GG|1|C|C|179
11GG|1|C|C|180
*
11GG|1|C|G|185
11GG|1|C|G|186
11GG|1|C|A|187
11GG|1|C|G|188
11GG|1|C|A|189
11GG|1|C|A|190
11GG|1|C|A|191
11GG|1|C|G|192
*
11GG|1|C|C|213
11GG|1|C|G|214

Current chains

Chain C

16S ribosomal RNA

Nearby chains

Chain 2

Small ribosomal subunit protein bS20