J4_11GG_007

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GGUUC*GGUGAG*CU*AAUCGUAC

Length

21 nucleotides

Bulged bases

11GG|1|I|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|I|G|1310
11GG|1|I|G|1311
11GG|1|I|U|1312
11GG|1|I|U|1313
11GG|1|I|C|1314
*
11GG|1|I|G|1338
11GG|1|I|G|1339
11GG|1|I|U|1340
11GG|1|I|G|1341
11GG|1|I|A|1342
11GG|1|I|G|1343
*
11GG|1|I|C|1404
11GG|1|I|U|1405
*
11GG|1|I|A|1597
11GG|1|I|A|1598
11GG|1|I|U|1599
11GG|1|I|C|1600
11GG|1|I|G|1601
11GG|1|I|U|1602
11GG|1|I|A|1603
11GG|1|I|C|1604

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L23

Chain k

50S ribosomal protein L34