J4_11GG_012

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GC*GC*GUGAUCC*GCUCAAC

Length

18 nucleotides

Bulged bases

11GG|1|I|U|2390, 11GG|1|I|A|2426

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|I|G|2282
11GG|1|I|C|2283
*
11GG|1|I|G|2325
11GG|1|I|C|2326
*
11GG|1|I|G|2389
11GG|1|I|U|2390
11GG|1|I|G|2391
11GG|1|I|A|2392
11GG|1|I|U|2393
11GG|1|I|C|2394
11GG|1|I|C|2395
*
11GG|1|I|G|2421
11GG|1|I|C|2422
11GG|1|I|U|2423
11GG|1|I|C|2424
11GG|1|I|A|2425
11GG|1|I|A|2426
11GG|1|I|C|2427

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain T

Large ribosomal subunit protein uL15

Chain e

50S ribosomal protein L27

Chain j

50S ribosomal protein L33

Chain l

50S ribosomal protein L35